GLORY DAY ~That Shining Day~ had multiple variants throughout the Advanced Generation series. The second variant featured lyrics from the second verse of the song but kept the original animation intact.
The ending starts with a blue sky and a few clouds as 3 small boxes with clips of Satoshi's Pokémon appear. After a few seconds, a box with Satoshi and a box with Haruka appears as well as another box filled with more of Satoshi's Pokémon appears. Takeshi, Masato and Pikachu also get a box featuring them as all of the boxes slow fade and shrink in size.
The next scene features the main characters in a group pan shot starting on the left with Takeshi and slowly moving to the right with Satoshi and Pikachu.
An upwards pan shot of Haruka and her current Pokémon in a field follows in the next scene after which Satoshi and his current Pokémon party on a hill is shown. Satoshi's Yukiwarashi bounces by as the scene transitions to Takeshi and Masato also sitting on a hill back to back with Takeshi's Foretos and Mizugorou playing beside them.
Takeshi's Runpappa dances around as the scene transitions to a picture of Rocket Gang just as the sun is setting. Musashi has her eyes closed and is smelling a rose as the rest of the Rocket Gang is up in their Nyarth balloon.
The blue sky background returns and few box clips of Rocket Gang are showed followed by the previous Pokémon clips. The clips disappear as the final shot shows the sunset as Satoshi and his friends walk together.